PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.9G428400.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 304aa    MW: 34024.7 Da    PI: 9.9806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.9G428400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-101860446
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                         k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  Sevir.9G428400.3.p 18 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 60
                        5899*************************96666666555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-81578IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.0E-81562No hitNo description
PROSITE profilePS502179.2891761IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-71962No hitNo description
PfamPF001701.7E-71960IPR004827Basic-leucine zipper domain
PROSITE patternPS0003602237IPR004827Basic-leucine zipper domain
PfamPF141443.8E-33101176IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MASNSSDRSD RSDKPMDQKV LRRLAQNREA ARKSRLRKKA YVQQLESSKL KLASLEQELQ  60
KARQQGIFIS SSGDQTHAMS GNGAMTFDLE YSRWQEEQNK QINELRTAVN AHASDSDLRL  120
IVDGIMAHYD EIFRLKGVAA KADVFHILSG MWKTPAERCF LWLGGFRSSE LLKLLVNQLE  180
PLTEQQLMGL SNLQQSSQQA EDALSQGMEA LQQSLAETLA GSLGPSGSSG NVANYMGQMA  240
MAMGKLGTLE NFLRQADNLR QQTLHQMQRI LTIRQAARAL LAIHDYFSRL RALSSLWLAR  300
PRE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0668520.0BT066852.1 Zea mays full-length cDNA clone ZM_BFb0077I20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984573.10.0PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_004984574.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK4ACB30.0K4ACB3_SETIT; Uncharacterized protein
STRINGSi036520m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-143bZIP family protein